Interaction databaseSupplement × PrescriptionReviewed May 2026

Melatonin and Pantoprazole, a synergy.

Melatonin has gastroprotective effects and increases lower esophageal sphincter tone, and small randomized trials show additive GERD symptom relief when combined with a PPI. Patients with persistent reflux on pantoprazole sometimes benefit from adjunctive bedtime melatonin. The evidence is emerging but mechanistically plausible.

One pair, every claim cited. The two substances, the type, the mechanism, the recommendation, and the primary literature.
Same shape as the other 1,729 pairs in the public database.

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At a glance

Substances
Melatonin and Pantoprazole
Pair type
Synergy
Evidence (highest tier)
Emerging
Source citations
2 sources
Stack Score effect
+2 to your Stack Score (per scored synergy row).
Scope
Supplement × Prescription
Last verified
May 30, 2026

Synergy · Emerging evidence

Synergy

What is happening. Melatonin has gastroprotective effects and increases lower esophageal sphincter tone, and small randomized trials show additive GERD symptom relief when combined with a PPI. Patients with persistent reflux on pantoprazole sometimes benefit from adjunctive bedtime melatonin. The evidence is emerging but mechanistically plausible.

Mechanism. Melatonin increases lower esophageal sphincter pressure, scavenges mucosal free radicals, and inhibits nitric oxide-mediated relaxation. These effects complement pantoprazole's irreversible inhibition of the gastric H+/K+-ATPase.

Recommendation. If you have ongoing reflux symptoms on pantoprazole, ask your prescriber about a trial of melatonin 3-6 mg at bedtime. Do not stop pantoprazole abruptly, since rebound acid hypersecretion is common.

Sources (2)
  1. Kandil TS, Mousa AA, El-Gendy AA, Abbas AM. The potential therapeutic effect of melatonin in Gastro-Esophageal Reflux Disease. BMC Gastroenterol. 2010;10:7. PMID 20082715
  2. Pereira RS. Regression of gastroesophageal reflux disease symptoms using dietary supplementation with melatonin, vitamins and aminoacids: comparison with omeprazole. J Pineal Res. 2006;41(3):195-200. PMID 16948779

Stack Score

How this pair moves the number.

Effect on the composite score

If both Melatonin and Pantoprazole are in the same stack, this pair applies +2 to your Stack Score (per scored synergy row).

The full algorithm, the clamping rules, and four worked stacks are documented at /methodology/stack-score.

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