Interaction databaseSupplement × PrescriptionReviewed May 2026

Berberine and Fluconazole, a caution.

Berberine inhibits CYP3A4 (and to a lesser extent CYP2D6), the same family of enzymes that fluconazole also inhibits. Stacking two CYP3A4 inhibitors can raise the systemic levels of co-prescribed CYP3A4 substrates (statins, calcium channel blockers, benzodiazepines, certain immunosuppressants) and prolong fluconazole's own half-life, increasing the risk of dose-related adverse effects such as hepatotoxicity and QT prolongation.

One pair, every claim cited. The two substances, the type, the mechanism, the recommendation, and the primary literature.
Same shape as the other 1,729 pairs in the public database.

Sourcing standards·Evidence tiers

From the interaction database

What the row says.

Every entry follows the same shape: what is happening, the mechanism, the recommendation, and the primary literature.

At a glance

Substances
Berberine and Fluconazole
Pair type
Caution
Evidence (highest tier)
Emerging
Source citations
2 sources
Stack Score effect
−5 to your Stack Score (per scored caution row).
Scope
Supplement × Prescription
Last verified
May 30, 2026

Caution · Emerging evidence

Caution

What is happening. Berberine inhibits CYP3A4 (and to a lesser extent CYP2D6), the same family of enzymes that fluconazole also inhibits. Stacking two CYP3A4 inhibitors can raise the systemic levels of co-prescribed CYP3A4 substrates (statins, calcium channel blockers, benzodiazepines, certain immunosuppressants) and prolong fluconazole's own half-life, increasing the risk of dose-related adverse effects such as hepatotoxicity and QT prolongation.

Mechanism. Berberine is a moderate, partly quasi-irreversible inhibitor of CYP3A4 and CYP2D6 in human liver microsomes. Combined with fluconazole's own CYP3A4/2C9 inhibition, the result is additive impairment of oxidative drug metabolism.

Recommendation. Avoid starting berberine during a fluconazole course. If you take berberine for blood sugar, hold it while on fluconazole and resume a few days after the course ends. Tell your prescriber about every CYP3A4 substrate you take.

Sources (2)
  1. Mostafavi-Pour Z, et al. Effects of Berberis vulgaris, and its active constituent berberine on cytochrome P450: a review. Pharm Biol. 2024. PMID 39141022
  2. Zhao Y, et al. Quasi-irreversible inhibition of CYP2D6 by berberine. Drug Metab Dispos. 2020. PMID 32987920

Stack Score

How this pair moves the number.

Effect on the composite score

If both Berberine and Fluconazole are in the same stack, this pair applies −5 to your Stack Score (per scored caution row).

The full algorithm, the clamping rules, and four worked stacks are documented at /methodology/stack-score.

Check your full routine

One pair was the worked example. NutriStack runs every pair in your stack at once.

Drop in your supplements and prescriptions and the public database surfaces every interaction, synergy, timing rule, and contraindication, every one linked to its primary source.

NutriStack is an informational and organizational tool, not a medical service, and not a substitute for professional advice. Always consult a qualified healthcare professional before starting, stopping, or changing any supplement or medication.